Reconstruction of C3 and C4 metabolism in Methylobacterium extorquens AM1 using transposon mutagenesis

References

1. Anthony C. 1982 The Biochemistry of Methylotrophs London: Associated Press;
   [Google Scholar]
2. Arps P. J, Fulton G. F, Minnich E. C., Lidstrom M. E. 1993; Genetics of serine pathway enzymes in Methylobacterium extorquens AM1: phospho enol pyruvate carboxylase and malyl coenzyme A lyase. J Bacteriol 175:3776–3783
   [Google Scholar]
3. Attwood M. M., Harder W. 1972; A rapid and specific enrichment procedure for Hyphomicrobium spp. Antonie Van Leeuwenhoek 38:369–377
   [Google Scholar]
4. Bolbot J. A., Anthony C. 1980; The metabolism of 1,2-propanediol by the facultative methylotroph Pseudomonas AM1. J Gen Microbiol 120:245–254
   [Google Scholar]
5. Chistoserdov A. Y, Chistoserdova L. V, McIntire W. S., Lidstrom M. E. 1994; The genetic organization of the mau gene cluster in Methylobacterium extorquens AM1: complete nucleotide sequence and generation and characteristics of mau mutants. J Bacteriol 176:4052–4065
   [Google Scholar]
6. Chistoserdova L. 1996; Metabolism of formaldehyde in M. extorquens AM1: molecular genetic analysis and mutant characterization. In Microbial Growth on C₁ Compounds pp  16–24 Edited by Lidstrom M. E., Tabita F. R. Dordrecht: Kluwer Academic;
   [Google Scholar]
7. Chistoserdova L., Lidstrom M. E. 1997; Identification and mutation of a gene required for glycerate kinase activity from a facultative methylotroph, Methylobacterium extorquens AM1. J Bacteriol 179:4946–4948
   [Google Scholar]
8. Chun K. T, Edenberg H. J, Kelley M. R., Goebl M. G. 1997; Rapid amplification of uncharacterized transposon-tagged DNA sequences from genomic DNA. Yeast 13:233–240
   [Google Scholar]
9. D'Argenio D. A, Gallagher L. A, Berg C. A., Manoil C. 2001; Drosophila as a model host for Pseudomonas aeruginosa infection. J Bacteriol 183:1466–1471
   [Google Scholar]
10. Dupuis A, Darrouzet E, Duborjal H, Pierrard B, Chevallet M, van Belzen R, Albracht S. P., Lunardi J. 1998; Distal genes of the nuo operon of Rhodobacter capsulatus equivalent to the mitochondrial ND subunits are all essential for the biogenesis of the respiratory NADH-ubiquinone oxidoreductase. Mol Microbiol 28:531–541
    [Google Scholar]
11. Flint D. H. 1994; Initial kinetic and mechanistic characterization of Escherichia coli fumarase A. Arch Biochem Biophys 311:509–516
    [Google Scholar]
12. Green L. S, Li Y, Emerich D. W, Bergersen F. J., Day D. A. 2000; Catabolism of α-ketoglutarate by a sucA mutant of Bradyrhizobium japonicum : evidence for an alternative tricarboxylic acid cycle. J Bacteriol 182:2838–2844
    [Google Scholar]
13. Korotkova N, Chistoserdova L, Kuksa V., Lidstrom M. E. 2002; Glyoxylate regeneration pathway in the methylotroph Methylobacterium extorquens AM1. J Bacteriol 184:1750–1758
    [Google Scholar]
14. Lidstrom M. E. 1992; The genetics and molecular biology of methanol-utilizing bacteria. In Methane and Methanol Utilizers pp  183–206 Edited by Murrell J. C., Dalton H. New York: Plenum;
    [Google Scholar]
15. Marx C. J., Lidstrom M. E. 2001; Development of improved versatile broad-host-range vectors for use in methylotrophs and other Gram-negative bacteria. Microbiology 147:2065–2075
    [Google Scholar]
16. Marx C. J, O'Brien B. N, Breezee J., Lidstrom M. E. 2003; Novel methylotrophy genes of Methylobacterium extorquens AM1 identified by using transposon mutagenesis including a putative dihydromethanopterin reductase. J Bacteriol 185:669–673
    [Google Scholar]
17. Miller V. L., Mekalanos J. J. 1988; A novel suicide vector and its use in construction of insertion mutations: osmoregulation of outer membrane proteins and virulence determinants in Vibrio cholerae requires toxR . J Bacteriol 170:2575–2583
    [Google Scholar]
18. Saito H., Miura K.-I. 1963; Preparation of transforming deoxyribonucleic acid by phenol treatment. Biochim Biophys Acta 72:619–629
    [Google Scholar]
19. Salem A. R, Wagner C, Hacking A. J., Quayle J. R. 1973; The metabolism of lactate and pyruvate by Pseudomonas AM1. J Gen Microbiol 76:375–388
    [Google Scholar]
20. Sambrook J, Fritsch E. F., Maniatis T. 1989 Molecular Cloning: a Laboratory Manual , 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory;
    [Google Scholar]
21. Schreyer R., Bock A. 1980; Phosphoglucose isomerase from Escherichia coli K10: purification, properties and formation under aerobic and anaerobic condition. Arch Microbiol 127:289–298
    [Google Scholar]
22. Simon R, Priefer U., Puhler A. 1983; A broad host range mobilization system for in vivo genetic engineering: transposon mutagenesis in Gram-negative bacteria. Bio/Technology 1:784–791
    [Google Scholar]
23. Taylor I. J., Anthony C. 1976; A biochemical basis for obligate methylotrophy: properties of a mutant of Pseudomonas AM1 lacking 2-oxoglutarate dehydrogenase. J Gen Microbiol 93:259–265
    [Google Scholar]
24. Thissen J, Desai S, McCartney P., Komuniecki R. 1986; Improved purification of the pyruvate dehydrogenase complex from Ascaris suum body wall muscle and characterization of PDH_a kinase activity. Mol Biochem Parasitol 21:129–138
    [Google Scholar]
25. van der Oost J, van Walraven H. S, Bogerd J, Smit A. B, Ewart G. D., Smith G. D. 1989; Nucleotide sequence of the gene proposed to encode the small subunit of the soluble hydrogenase of the thermophilic unicellular cyanobacterium Synechococcus PCC 6716. Nucleic Acids Res 17:10098
    [Google Scholar]
26. Van Dien S. J., Lidstrom M. E. 2002; Stoichiometric model for evaluating the metabolic capabilities of the facultative methylotroph Methylobacterium extorquens AM1, with application to reconstruction of C3 and C4 metabolism. Biotechnol Bioeng 78:296–312
    [Google Scholar]