Bacterial glycoproteomics

References

1. Andersen J. S, Mann M. 2000; Functional genomics by mass spectrometry. FEBS Lett 480:25–31 [CrossRef]
   [Google Scholar]
2. Benz I, Schmidt M. A. 2002; Never say never again: protein glycosylation in pathogenic bacteria. Mol Microbiol 45:267–276 [CrossRef]
   [Google Scholar]
3. Bock K, Schuster-Kolbe J, Altman E, Allmaier G, Stahl B, Christian R, Sleytr U. B, Messner P. 1994; Primary structure of the O -glycosidically linked glycan chain of the crystalline surface layer glycoprotein of Thermoanaerobacter thermohydrosulfuricus L111-69. Galactosyl tyrosine as a novel linkage unit. J Biol Chem 269:7137–7144
   [Google Scholar]
4. Castric P, Cassels F. J, Carlson R. W. 2001; Structural characterization of the Pseudomonas aeruginosa 1244 pilin glycan. J Biol Chem 276:26479–26485 [CrossRef]
   [Google Scholar]
5. Dell A, Morris H. R. 2001; Glycoprotein structure determination by mass spectrometry. Science 291:2351–2356 [CrossRef]
   [Google Scholar]
6. Dempski R. E., Jr, Imperiali B. 2002; Oligosaccharyl transferase: gatekeeper to the secretory pathway. Curr Opin Chem Biol 6:844–850 [CrossRef]
   [Google Scholar]
7. Dobos K. M, Khoo K. H, Swiderek K. M, Brennan P. J, Belisle J. T. 1996; Definition of the full extent of glycosylation of the 45-kilodalton glycoprotein of Mycobacterium tuberculosis . J Bacteriol 178:2498–2506
   [Google Scholar]
8. Feldman M. F, Wacker M, Hernandez M. 7 other authors 2005; Engineering N -linked protein glycosylation with diverse O antigen lipopolysaccharide structures in Escherichia coli . Proc Natl Acad Sci U S A 102:3016–3021 [CrossRef]
   [Google Scholar]
9. Fry B. N, Korolik V, Pennings M. T, Zalm R, Teunis B. J, Coloe P. J, ten Brinke J. A, van der Zeijst B. A. 1998; The lipopolysaccharide biosynthesis locus of Campylobacter jejuni 81116. Microbiology 144:2049–2061 [CrossRef]
   [Google Scholar]
10. Goon S, Kelly J. F, Logan S. M, Ewing C. P, Guerry P. 2003; Pseudaminic acid, the major modification on Campylobacter flagellin , is synthesized via the Cj1293 gene. Mol Microbiol 50:659–671 [CrossRef]
    [Google Scholar]
11. Guerry P, Doig P, Alm R. A, Burr D. H, Kinsella N, Trust T. J. 1996; Identification and characterization of genes required for post-translational modification of Campylobacter coli VC167 flagellin. Mol Microbiol 19:369–378 [CrossRef]
    [Google Scholar]
12. Hakansson K, Cooper H. J, Emmett M. R, Costello C. E, Marshall A. G, Nilsson C. L. 2001; Electron capture dissociation and infrared multiphoton dissociation MS/MS of an N -glycosylated tryptic peptic to yield complementary sequence information. Anal Chem 73:4530–4536 [CrossRef]
    [Google Scholar]
13. Hegge F. T, Hitchen P. G, Aas F. E. 9 other authors 2004; Unique modifications with phosphocholine and phosphoethanolamine define alternate antigenic forms of Neisseria gonorrhoeae type IV pili. Proc Natl Acad Sci U S A 101:10798–10803 [CrossRef]
    [Google Scholar]
14. Linton D, Allan E, Karlyshev A. V, Cronshaw A. D, Wren B. W. 2002; Identification of N -acetylgalactosamine-containing glycoproteins PEB3 and CgpA in Campylobacter jejuni . Mol Microbiol 43:497–508 [CrossRef]
    [Google Scholar]
15. Linton D, Dorrell N, Hitchen P. G. 7 other authors 2005; Functional analysis of the Campylobacter jejuni N -linked protein glycosylation pathway. Mol Microbiol 55:1695–1703 [CrossRef]
    [Google Scholar]
16. Mann M, Hendrickson R. C, Pandey A. 2001; Analysis of proteins and proteomes by mass spectrometry. Annu Rev Biochem 70:437–473 [CrossRef]
    [Google Scholar]
17. Medzihradszky K. F, Campbell J. M, Baldwin M. A, Falick A. M, Juhasz P, Vestal M. L, Burlingame A. L. 2000; The characteristics of peptide collision-induced dissociation using a high-performance MALDI-TOF/TOF tandem mass spectrometer. Anal Chem 72:552–558 [CrossRef]
    [Google Scholar]
18. Mescher M. F, Strominger J. L. 1976; Purification and characterization of a prokaryotic glucoprotein from the cell envelope of Halobacterium salinarium . J Biol Chem 251:2005–2014
    [Google Scholar]
19. Parkhill J, Wren B. W, Mungall K. 18 other authors 2000; The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences. Nature 403:665–668 [CrossRef]
    [Google Scholar]
20. Power P. M, Jennings M. P. 2003; The genetics of glycosylation in Gram-negative bacteria. FEMS Microbiol Lett 218:211–222 [CrossRef]
    [Google Scholar]
21. Schaffer C, Messner P. 2004; Surface-layer glycoproteins: an example for the diversity of bacterial glycosylation with promising impacts on nanobiotechnology. Glycobiology 14:31R–42R [CrossRef]
    [Google Scholar]
22. Schirm M, Soo E. C, Aubry A. J, Austin J, Thibault P, Logan S. M. 2003; Structural, genetic and functional characterization of the flagellin glycosylation process in Helicobacter pylori . Mol Microbiol 48:1579–1592 [CrossRef]
    [Google Scholar]
23. Schirm M, Arora S. K, Verma A, Vinogradov E, Thibault P, Ramphal R, Logan S. M. 2004a; Structural and genetic characterization of glycosylation of type a flagellin in Pseudomonas aeruginosa . J Bacteriol 186:2523–2531 [CrossRef]
    [Google Scholar]
24. Schirm M, Kalmokoff M, Aubry A, Thibault P, Sandoz M, Logan S. M. 2004b; Flagellin from Listeria monocytogenes is glycosylated with beta- O -linked N -acetylglucosamine. J Bacteriol 186:6721–6727 [CrossRef]
    [Google Scholar]
25. Schirm M, Schoenhofen I. C, Logan S. M, Waldron K. C, Thibault P. 2005; Identification of unusual bacterial glycosylation by tandem mass spectrometry analyses of intact proteins. Anal Chem 77:7774–7782 [CrossRef]
    [Google Scholar]
26. Schoenhofen I. C, McNally D. J, Vinogradov E, Whitfield D, Young N. M, Dick S, Wakarchuk W. W, Brisson J. R, Logan S. M. 2006; Functional characterization of dehydratase/aminotransferase pairs from Helicobacter and Campylobacter : enzymes distinguishing the pseudaminic acid and bacillosamine biosynthetic pathways. J Biol Chem 281:723–732 [CrossRef]
    [Google Scholar]
27. Shevchenko A, Loboda A, Ens W, Standing K. G. 2000; MALDI quadrupole time-of-flight mass spectrometry: a powerful tool for proteomic research. Anal Chem 72:2132–2141 [CrossRef]
    [Google Scholar]
28. Stimson E, Virji M, Makepeace K. 9 other authors 1995; Meningococcal pilin: a glycoprotein substituted with digalactosyl 2,4-diacetamido-2,4,6-trideoxyhexose. Mol Microbiol 17:1201–1214 [CrossRef]
    [Google Scholar]
29. Szymanski C. M, Wren B. W. 2005; Protein glycosylation in bacterial mucosal pathogens. Nat Rev Microbiol 3:225–237 [CrossRef]
    [Google Scholar]
30. Szymanski C. M, Yao R, Ewing C. P, Trust T. J, Guerry P. 1999; Evidence for a system of general protein glycosylation in Campylobacter jejuni . Mol Microbiol 32:1022–1030 [CrossRef]
    [Google Scholar]
31. Szymanski C. M, Michael F. S, Jarrell H. C, Li J, Gilbert M, Larocque S, Vinogradov E, Brisson J. R. 2003; Detection of conserved N -linked glycans and phase-variable lipooligosaccharides and capsules from Campylobacter cells by mass spectrometry and high resolution magic angle spinning NMR spectroscopy. J Biol Chem 278:24509–24520 [CrossRef]
    [Google Scholar]
32. Taylor M. T, Drickamer K. 2002 Introduction to Glycobiology Oxford: Oxford University Press;
    [Google Scholar]
33. Thibault P, Logan S. M, Kelly J. F, Brisson J. R, Ewing C. P, Trust T. J, Guerry P. 2001; Identification of the carbohydrate moieties and glycosylation motifs in Campylobacter jejuni flagellin. J Biol Chem 276:34862–34870 [CrossRef]
    [Google Scholar]
34. Upreti R. K, Kumar M, Shankar V. 2003; Bacterial glycoproteins: functions, biosynthesis and applications. Proteomics 3:363–379 [CrossRef]
    [Google Scholar]
35. Voisin S, Houliston R. S, Kelly J, Brisson J. R, Watson D, Bardy S. L, Jarrell K. F, Logan S. M. 2005; Identification and characterization of the unique N -linked glycan common to the flagellins and S-layer glycoprotein of Methanococcus voltae . J Biol Chem 280:16586–16593 [CrossRef]
    [Google Scholar]
36. Wacker M, Linton D, Hitchen P. G. 8 other authors 2002; N -linked glycosylation in Campylobacter jejuni and its functional transfer into E. coli . Science 298:1790–1793 [CrossRef]
    [Google Scholar]
37. Yates J. R., 3rd. 2004; Mass spectral analysis in proteomics. Annu Rev Biophys Biomol Struct 33:297–316 [CrossRef]
    [Google Scholar]
38. Young N. M, Brisson J. R, Kelly J. 8 other authors 2002; Structure of the N -linked glycan present on multiple glycoproteins in the Gram-negative bacterium, Campylobacter jejuni . J Biol Chem 277:42530–42539 [CrossRef]
    [Google Scholar]