1887

Abstract

The basidiomycete has many advantages as a model organism for studying sexual development and meiosis, but it has been difficult to investigate using reverse-genetics methods, such as gene disruption by homologous recombination. Here, gene repression by dsRNA-mediated gene silencing was tried as an alternative method for reverse-genetics studies. It was shown that transformation of the dsRNA expression construct (dsRNA) resulted in genomic insertion of dsRNA and paucity of the transcript. First, dsRNA was transformed into the homothallic strain to generate a homozygote in which both nuclei had a copy of dsRNA. The -repressed strain showed abnormal homologous chromosome synapsis during meiosis. Basidiospore production was reduced to 16 % by the induction of dsRNA. However, approximately 60 % of basidiospores were viable. Next, a heterozygote was generated in which one nucleus had a copy of dsRNA. The phenotype was similar to that of the homozygote. These results are not only the first demonstration of dsRNA-mediated gene silencing in a member of the homobasidiomycete fungi, to which 90 % of mushroom species belong, but also the first successful use of a reverse-genetics approach in research.

Loading

Article metrics loading...

/content/journal/micro/10.1099/mic.0.28209-0
2005-11-01
2024-04-19
Loading full text...

Full text loading...

/deliver/fulltext/micro/151/11/3669.html?itemId=/content/journal/micro/10.1099/mic.0.28209-0&mimeType=html&fmt=ahah

References

  1. Bernstein E., Caudy A. A., Hammond S. M., Hannon G. J. 2001; Role for a bidentate ribonuclease in the initiation step of RNA interference. Nature 409:363–366 [CrossRef]
    [Google Scholar]
  2. Binninger D. M., Skrzynia C., Pukkila P. J., Casselton L. A. 1987; DNA-mediated transformation of the basidiomycete Coprinus cinereus . EMBO J 6:835–840
    [Google Scholar]
  3. Binninger D. M., Le Chevanton L., Skrzynia C., Shubkin C. D., Pukkila P. J. 1991; Targeted transformation in Coprinus cinereus . Mol Gen Genet 227:245–251 [CrossRef]
    [Google Scholar]
  4. Bishop D. K., Park D., Xu L., Kleckner N. 1992; DMC1: a meiosis-specific yeast homolog of E. coli recA required for recombination, synaptonemal complex formation, and cell cycle progression. Cell 69:439–456 [CrossRef]
    [Google Scholar]
  5. Casselton L., Zolan M. 2002; The art and design of genetic screens: filamentous fungi. Nat Rev Genet 3:683–697 [CrossRef]
    [Google Scholar]
  6. Catalanotto C., Azzalin G., Macino G., Cogoni C. 2000; Gene silencing in worms and fungi. Nature 404:245 [CrossRef]
    [Google Scholar]
  7. Celerin M., Merino S. T., Stone J. E., Menzie A. M., Zolan M. E. 2000; Multiple roles of Spo11 in meiotic chromosome behavior. EMBO J 19:2739–2750 [CrossRef]
    [Google Scholar]
  8. Cummings W. J., Celerin M., Crodian J., Brunick L. K., Zolan M. E. 1999; Insertional mutagenesis in Coprinus cinereus : use of a dominant selectable marker to generate tagged, sporulation-defective mutants. Curr Genet 36:371–382 [CrossRef]
    [Google Scholar]
  9. Elbashir S. M., Harborth J., Lendeckel W., Yalcin A., Weber K., Tuschl T. 2001; Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells. Nature 411:494–498 [CrossRef]
    [Google Scholar]
  10. Fire A., Xu S., Montgomery M. K., Kostas S. A., Driver S. E., Mello C. C. 1998; Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans . Nature 391:806–811 [CrossRef]
    [Google Scholar]
  11. Granado J. D., Kertesz-Chaloupkova K., Aebi M., Kues U. 1997; Restriction enzyme-mediated DNA integration in Coprinus cinereus . Mol Gen Genet 256:28–36 [CrossRef]
    [Google Scholar]
  12. Hamada F., Namekawa S., Kasai N., Nara T., Kimura S., Sugawara F., Sakaguchi K. 2002; Proliferating cell nuclear antigen from a basidiomycete, Coprinus cinereus . Alternative truncation and expression in meiosis. Eur J Biochem 269:164–174 [CrossRef]
    [Google Scholar]
  13. Hammond S. M., Bernstein E., Beach D., Hannon G. J. 2000; An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells. Nature 404:293–296 [CrossRef]
    [Google Scholar]
  14. Kamada T. 2002; Molecular genetics of sexual development in the mushroom Coprinus cinereus . Bioessays 24:449–459 [CrossRef]
    [Google Scholar]
  15. Kanda T., Arakawa H., Yasuda Y., Takemaru T. 1990; Basidiospore formation in a mutant of incompatibility factors and in mutants that arrest at meta-anaphase-I in Coprinus cinereus . Exp Mycol 14:218–226 [CrossRef]
    [Google Scholar]
  16. Kues U. 2000; Life history and developmental processes in the basidiomycete Coprinus cinereus . Microbiol Mol Biol Rev 64:316–353 [CrossRef]
    [Google Scholar]
  17. Liu H., Cottrell T. R., Pierini L. M., Goldman W. E., Doering T. L. 2002; RNA interference in the pathogenic fungus Cryptococcus neoformans . Genetics 160:463–470
    [Google Scholar]
  18. Lu B. C., Gallo N., Kues U. 2003; White-cap mutants and meiotic apoptosis in the basidiomycete Coprinus cinereus . Fungal Genet Biol 39:82–93 [CrossRef]
    [Google Scholar]
  19. Makino R., Kamada T. 2004; Isolation and characterization of mutations that affect nuclear migration for dikaryosis in Coprinus cinereus . Curr Genet 45:149–156 [CrossRef]
    [Google Scholar]
  20. Martens H., Novotny J., Oberstrass J., Steck T. L., Postlethwait P., Nellen W. 2002; RNAi in Dictyostelium : the role of RNA-directed RNA polymerases and double-stranded RNase. Mol Biol Cell 13:445–453 [CrossRef]
    [Google Scholar]
  21. Masson J. Y., West S. C. 2001; The Rad51 and Dmc1 recombinases: a non-identical twin relationship. Trends Biochem Sci 26:131–136 [CrossRef]
    [Google Scholar]
  22. Misquitta L., Paterson B. M. 1999; Targeted disruption of gene function in Drosophila by RNA interference (RNA-i): a role for nautilus in embryonic somatic muscle formation. Proc Natl Acad Sci U S A 96:1451–1456 [CrossRef]
    [Google Scholar]
  23. Montgomery M. K. 2004; RNA interference: historical overview and significance. Methods Mol Biol 265:3–21
    [Google Scholar]
  24. Murata Y., Fujii M., Zolan M. E., Kamada T. 1998; Molecular analysis of pcc1 , a gene that leads to A-regulated sexual morphogenesis in Coprinus cinereus . Genetics 149:1753–1761
    [Google Scholar]
  25. Namekawa S., Hamada F., Ishii S. 9 other authors 2003a; Coprinus cinereus DNA ligase I during meiotic development. Biochim Biophys Acta 162747–55 [CrossRef]
    [Google Scholar]
  26. Namekawa S., Hamada F., Sawado T., Ishii S., Nara T., Ishizaki T., Ohuchi T., Arai T., Sakaguchi K. 2003b; Dissociation of DNA polymerase alpha-primase complex during meiosis in Coprinus cinereus . Eur J Biochem 270:2137–2146 [CrossRef]
    [Google Scholar]
  27. Namekawa S., Ichijima Y., Hamada F., Kasai N., Iwabata K., Nara T., Teraoka H., Sugawara F., Sakaguchi K. 2003c; DNA ligase IV from a basidiomycete, Coprinus cinereus , and its expression during meiosis. Microbiology 149:2119–2128 [CrossRef]
    [Google Scholar]
  28. Nara T., Saka T., Sawado T., Takase H., Ito Y., Hotta Y., Sakaguchi K. 1999; Isolation of a LIM15/DMC1 homolog from the basidiomycete Coprinus cinereus and its expression in relation to meiotic chromosome pairing. Mol Gen Genet 262:781–789 [CrossRef]
    [Google Scholar]
  29. Pukkila P. J., Lu B. C. 1985; Silver staining of meiotic chromosomes in the fungus, Coprinus cinereus . Chromosoma 91:108–112 [CrossRef]
    [Google Scholar]
  30. Ramesh M. A., Zolan M. E. 1995; Chromosome dynamics in rad12 mutants of Coprinus cinereus . Chromosoma 104:189–202 [CrossRef]
    [Google Scholar]
  31. Rao P. S., Niederpruem D. J. 1969; Carbohydrate metabolism during morphogenesis of Coprinus lagopus (sensu Buller). J Bacteriol 100:1222–1228
    [Google Scholar]
  32. Raponi M., Arndt G. M. 2003; Double-stranded RNA-mediated gene silencing in fission yeast. Nucleic Acids Res 31:4481–4489 [CrossRef]
    [Google Scholar]
  33. Swamy S., Uno I., Ishikawa T. 1984; Morphogenic effects of mutations at the A and B inconpatability factors in Coprinus cinereus . J Gen Microbiol 130:3219–3224
    [Google Scholar]
  34. Tabara H., Sarkissian M., Kelly W. G., Fleenor J., Grishok A., Timmons L., Fire A., Mello C. C. 1999; The rde-1 gene, RNA interference, and transposon silencing in C. elegans . Cell 99:123–132 [CrossRef]
    [Google Scholar]
  35. Waterhouse P. M., Graham M. W., Wang M. B. 1998; Virus resistance and gene silencing in plants can be induced by simultaneous expression of sense and antisense RNA. Proc Natl Acad Sci U S A 95:13959–13964 [CrossRef]
    [Google Scholar]
  36. Yamaguchi T., Namekawa S. H., Hamada F. N. 11 other authors 2004; Expression of flap endonuclease-1 during meiosis in a basidiomycete, Coprinus cinereus . Fungal Genet Biol 41:493–500 [CrossRef]
    [Google Scholar]
  37. Yoshida K., Kondoh G., Matsuda Y., Habu T., Nishimune Y., Morita T. 1998; The mouse RecA-like gene Dmc1 is required for homologous chromosome synapsis during meiosis. Mol Cell 1:707–718 [CrossRef]
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/micro/10.1099/mic.0.28209-0
Loading
/content/journal/micro/10.1099/mic.0.28209-0
Loading

Data & Media loading...

Supplements

Supplementary material 1

PDF

Supplementary material 2

PDF
This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error