1887

Abstract

Heat shock of CU1147, a strain lysogenic for SPβc2, a prophage with a thermosensitive repressor, results in phage induction and subsequent cell lysis. Cloning in and sequencing of a DNA fragment of prophage SPβ led to the identification of , the gene encoding a 367 amino acid polypetide with a molecular mass of 39.6 kDa. Purified BlyA obtained from the clone exhibited an -acetylmuramoyl-L-alanine amidase activity. Insertional mutagenesis confirmed that the latter enzyme was associated with SPβ-phage-mediated ceil lysis. Analysis of the neighbouring sequence suggested that the two ORFs immediately downstream of and belonging to the same operon encode polypeptides which may be involved in the release of the endolysin. The presence on the chromosomes of B. subtilis or related . of other, similar genes, and their possible relationship, is discussed.

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1998-04-01
2024-04-28
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References

  1. Myers W., E. W., Lipman D. J. (1990); Basic local alignment search tool.. J, Mol Biol 215,403—410.
    [Google Scholar]
  2. Anagnostopoulos C. (1990) Genetic rearrangements in Bacillus subtilis.. In The Bacterial Chromosome Edited by Riley M., Drlica C. The Bacterial Chromosome Washington DC:: American Society for Microbiology;361–371
    [Google Scholar]
  3. Burkholder P. R., Giles N. H. (1947); Induced biochemical mutants in Bacillus subtilis.. American Journal of Botany, 34:(6),345–348 [View Article]
    [Google Scholar]
  4. Buxton R. S. (1980); Selection of Bacillus subtilis 168 mutants with deletions of the PBSX prophage.. Journal of General Virology, 46:(2),427–437 [View Article]
    [Google Scholar]
  5. Campbell A. M. (1996) Cryptic prophages. In Escherichia coli and Salmonella: Cellular and Molecular Biology.. In: Neidhardt F. C., et al. Washington DC:: American Society for Microbiology;2041–2046
    [Google Scholar]
  6. Chung C. T., Niemela S. L., Miller R. H. (1989); One-step preparation of competent Escherichia coli: transformation and storage of bacterial cells in the same solution.. Proc Natl Acad Sci USA, 86:(7),2172–2175 [View Article]
    [Google Scholar]
  7. Croux C., Ronda C., Lòpez R., Garcia J. L. (1993); Interchange of functional domains switches enzyme specificity: construction of a chimeric pneumococcal-clostridial cell wall lytic enzyme.. Molecular Microbiology, 9:(5),1019–1025 [View Article]
    [Google Scholar]
  8. Dedonder R. A., Lepesant J. A., Lepesant-Keizlarova J., Billault A., Steinmetz M., Kunst F. (1977); Construction of a kit of reference strains for rapid genetic mapping in Bacillus subtilis 168. Appl Environ Microbiol, 33989–993
    [Google Scholar]
  9. Del Sal G., Manfioletti G., Schneider C. (1988); A one-tube plasmid DNA mini-preparation suitable for sequencing.. Nucleic Acids Research, 16:(20),9878–9878 [View Article]
    [Google Scholar]
  10. Foster S. J. (1991); Cloning, expression, sequence analysis and biochemical characterization of an autolytic amidase of Bacillus subtilis 168 trpC2.. Journal of General Microbiology, 137:(8),1987–1998 [View Article]
    [Google Scholar]
  11. Foster S. J. (1992); Analysis of the autolysins of Bacillus subtilis 168 during vegetative growth and differentiation by using renaturing polyacrylamide gel electrophoresis.. Journal of Bacteriology, 174:(2),464–470 [View Article]
    [Google Scholar]
  12. Foster S. J. (1993); Analysis of Bacillus subtilis 168 prophage- associated lytic enzymes; identification and characterization of CWLA-related prophage proteins.. Journal of General Microbiology, 139:(12),31773184–3184 [View Article]
    [Google Scholar]
  13. Freier S. M., Kierzek R., Jaeger J. A., Sugimoto N., Caruthers M. H. et al. (1986); Improved free-energy parameters for predictions of RNA duplex stability.. Proc Natl Acad Sci USA, 83:(24),9373–9377 [View Article]
    [Google Scholar]
  14. Gamier T., Cole S. T. (1988a); Complete nucleotide sequence and genetic organization of the bacteriocinogenic plasmid, pIP404, from Clostridium perfringens.. Plasmid, 19:(2),134–150 [View Article]
    [Google Scholar]
  15. Gamier T., Cole S. T. (1988b); Studies of UV-inducible promoters from Clostridium perfringens in vivo and in vitro.. Molecular Microbiology, 2:(5),607–614 [View Article]
    [Google Scholar]
  16. Ghuysen J.-M., Lamotte-Brasseur J., Joris B., Shockman G. D. (1994); Binding site-shaped repeated sequences of bacterial wall peptidoglycan hydrolases.. Febs Letters, 342:(1),23–28 [View Article]
    [Google Scholar]
  17. Glaser P., Kunst F., Arnaud M., Coudart M.-P., Gonzales W. et al. (1993); Bacillus subtilis genome project: cloning and sequencing of the 97 kb region from 325° to 333°.. Molecular Microbiology, 10:(2),371–384 [View Article]
    [Google Scholar]
  18. Heery D. M., Gannon F., Powell R. (1990); A simple method for subcloning DNA fragments from gel slices.. Trends Genet 6:173–4690
    [Google Scholar]
  19. von Heijne G. (1986); A new method for predicting signal sequence cleavage sites.. Nucleic Acids Res 14:4683–4690 [View Article]
    [Google Scholar]
  20. Karamata D., Gross J. D. (1970); Isolation and genetic analysis of temperature-sensitive mutants of Bacillus subtilis 168.. Molecular & General Genetics, 207:(1),73–81 [View Article]
    [Google Scholar]
  21. Kuroda A., Sekiguchi J. (1990); Cloning, sequencing and genetic mapping of a Bacillus subtilis cell wall hydrolase gene.. Journal of General Microbiology, 136:(11),2209–2216 [View Article]
    [Google Scholar]
  22. Kyte J., Doolittle R. F. (1982); A simple method for displaying the hydropathic character of a protein.. Journal of Molecular Biology, 157:(1),105–132 [View Article]
    [Google Scholar]
  23. Lazarevic V., Margot P., Soldo B., Karamata D. (1992); Sequencing and analysis of the Bacillus subtilis lytRABC diver- gon: a regulatory unit encompassing the structural genes of the N-acetylmuramoyl-L-alanine amidase and its modifier. Journal of General Microbiology, 1381949–1961
    [Google Scholar]
  24. Lee J. K., Edwards C. W., Hulett F. M. (1991); Identification of four unique clones encoding 10 kDa proteins from Bacillus that cause phenotypic complementation of a phoA mutant strain of Escherichia coli.. Journal of General Microbiology, 137:(3),667–677 [View Article]
    [Google Scholar]
  25. Loessner M. J., Wendlinger G., Scherer S. (1995); Heterogeneous endolysins in Listeria monocytogenes bacteriophages: a new class of enzymes and evidence for conserved holin genes within the siphoviral lysis cassettes.. Molecular Microbiology, 16:(6),1231–1241 [View Article]
    [Google Scholar]
  26. Loessner M. J., Maier S. K., Daubek-Puza H., Wendlinger G., Scherer S. (1997); Three Bacillus cereus bacteriophage endolysins are unrelated but reveal high homology to cell wall hydrolases from different bacilli.. Journal of Bacteriology, 179:(9),2845–2851 [View Article]
    [Google Scholar]
  27. Longchamp P. F., MauSl C., Karamata D. (1994); Lytic enzymes associated with defective prophages of Bacillus subtilis: sequencing and characterization of the region comprising the N- acetylmuramoyl-L-alanine amidase gene of prophage PBSX.. Microbiology, 140:(8),1855–1867 [View Article]
    [Google Scholar]
  28. Lopez R., Garcia J. L., Garcia E., Ronda C., Garcia P. (1992); Structural analysis and biological significance of the cell wall lytic enzymes of Streptococcus pneumoniae and its bacteriophage. Fems Microbiology Letters, 100439–448
    [Google Scholar]
  29. Margot P., Karamata D. (1992); Identification of the structural genes for N-acetylmuramoyl-L-alanine amidase and its modifier in Bacillus subtilis 168: inactivation of these genes by insertional mutagenesis has no effect on growth or cell separation.. Molecular & General Genetics, 232:(3),359–366 [View Article]
    [Google Scholar]
  30. Margot P., Roten C.-A., Karamata D. (1991); N-acetyl- muramoyl-L-alanine amidase assay based on specific radioactive labeling of muropeptide L-alanine: quantitation of the enzyme activity in the autolysin deficient Bacillus subtilis 168, flaD strain.. Analytical Biochemistry, 198:(1),15–18 [View Article]
    [Google Scholar]
  31. Margot P., Mauel C., Karamata D. (1994); The gene of the N- acetylglucosaminidase, a Bacillus subtilis 168 cell wall hydrolase not involved in vegetative cell autolysis.. Molecular Microbiology, 12:(4),535–545 [View Article]
    [Google Scholar]
  32. Margot P., Wahlen M., Gholamhuseinian A., Piggot P. J., Karamata D. (1998); The lytE gene of Bacillus subtilis 168 encodes a cell wall hydrolase.. Journal of Bacteriology, 180(3),749–752 [View Article]
    [Google Scholar]
  33. Mau€l C., Karamata D. (1984); Characterization of proteins induced by mitomycin C treatment of Bacillus subtilis.. Journal of Virology, 49:(3),806–812 [View Article]
    [Google Scholar]
  34. Mizuno M., Masuda S., Takemaru K., Hosono 5., Sato T. et al. (1996); Systematic sequencing of the 283 kb 210°-232° region of the Bacillus subtilis genome containing the skin element and many sporulation genes.. Microbiology, 142:(11),3103–3111 [View Article]
    [Google Scholar]
  35. Needleman S. B., Wunsch C. D. (1970); A general method applicable to the search for similarities in the amino acid sequence of two proteins.. Journal of Molecular Biology, 48:(3),443–453 [View Article]
    [Google Scholar]
  36. Noirot P., Petit M. A., Ehrlich S. D. (1987); Plasmid replication stimulates DNA recombination in Bacillus subtilis.. Journal of Molecular Biology, 196:(1),39–48 [View Article]
    [Google Scholar]
  37. Oda Y., Nakayama R., Kuroda A., Sekiguchi J. (1993); Molecular cloning, sequence analysis, and characterization of a new cell wall hydrolase, CwlL, of Bacillus licheniformis. Molecular & General Genetics, 241380–388
    [Google Scholar]
  38. Okamoto K., Mudd J. A., Mangan J., Huang W. M., Subbaiah T. V. et al. (1968); Properties of the defective phage of Bacillus subtilis.. Journal of Molecular Biology, 34:(3),413–128 [View Article]
    [Google Scholar]
  39. Platteeuw C., de Vos W. M. (1992); Location, characterization and expression of lytic enzyme-encoding gene, lytA, of Lacto-coccus lactis bacteriophage φUS3.. Gene, 118:(1),115–120 [View Article]
    [Google Scholar]
  40. Potvin G., Leclerc D., Tremblay G., Asselin A., Bellemare G. Cloning, sequencing and expression of a Bacillus bacteriolytic enzyme in Escherichia coli. Molecular & General Genetics, 214241–248
    [Google Scholar]
  41. Rosenthal R., Toye P. A., Korman R. Z., Zahler S. A. (1979); The prophage of SP^c2dc/tK1, a defective specialized transducing phage of Bacillus subtilis. Genetics, 92721–739
    [Google Scholar]
  42. Sanger F., Nicklen S., Coulson A. R. (1977); DNA sequencing with chain-terminating inhibitors.. Proc Natl Acad Sci USA, 74:(12),5463–5467 [View Article]
    [Google Scholar]
  43. Steiner M., Lubitz W., Blasi U. (1993); The missing link in phage lysis of Gram-positive bacteria: gene 14 of Bacillus subtilis phage <j>29 encodes the functional homolog of lambda S protein.. Journal of Bacteriology, 175:(4),1038–1042 [View Article]
    [Google Scholar]
  44. Studer R. (1988); Caracterisation de la paroi native de Bacillus subtilis et etude des proteines qui lui sont associees. Thesis University of Lausanne;
  45. Studer R. E., Karamata D. (1988) Cell wall proteins in Bacillus subtilis.. In: Actor P. , (eds.) Antibiotic Inhibition of Bacterial Cell Surface Assembly and Function Washington DC:: American Society for Microbiology;146–150
    [Google Scholar]
  46. Young R. (1992); Bacteriophage lysis: mechanism and regulation.. Microbiological Reviews, 56:(3),430–480 [View Article]
    [Google Scholar]
  47. Young R., Bläsi U. (1995); Holins: form and function in bacteriophage lysis.. Fems Microbiology Reviews, 17:(1–2),191–205 [View Article]
    [Google Scholar]
  48. Zahler S. A. (1982) Specialized transduction in Bacillus subtilis.. In: Dubnau D. A. , (eds.) Molecular Biology of the Bacilli vol. 1 New York:: Academic Press;269–305
    [Google Scholar]
  49. Zahler S. A. (1993) Temperate bacteriophages. In Bacillus subtilis and Other Grant-positive Bacteria: Biochemistry, Physiology, and Molecular Genetics.. In: Sonenshein A. L., Hoch J. A., Losick R. Washington DC:: American Society for Microbiology;831–842
    [Google Scholar]
  50. Zink R., Loessner M. J., Scherer S. (1995); Characterization of cryptic prophages (monocins) in Listeria and sequence analysis of a holin/endolysin gene.. Microbiology, 141:(10),2577–2584 [View Article]
    [Google Scholar]
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