Inhibition of bacteriophage replication in Streptococcus thermophilus by subunit poisoning of primase

References

1. Altermann E., Klein J. R., Henrich B. 1999; Primary structure and features of the genome of the Lactobacillus gasseri temperate bacteriophage φ adh. Gene 236:333–346
   [Google Scholar]
2. Altschul S. F., Madden T. L., Schäffer A. A., Zhang J., Zhang Z., Miller W., Lipman D. J. 1997; Gapped blast and psi-blast, a new generation of protein database search programs. Nucleic Acids Res 25:3389–3402
   [Google Scholar]
3. Bouchard J. D., Moineau S. 2000; Homologous recombination between a lactococcal bacteriophage and the chromosome of its host strain. Virology 270:65–75
   [Google Scholar]
4. Brüssow H., Desiere F. 2001; Comparative phage genomics and the evolution of Siphoviridae : insights from dairy phages. Mol Microbiol 39:213–222
   [Google Scholar]
5. Brüssow H., Probst A., Fremont M., Sidoti J. 1994; Distinct Streptococcus thermophilus bacteriophages share an extremely conserved DNA fragment. Virology 200:854–857
   [Google Scholar]
6. Bruttin A., Desiere F., d'Amico N., Guérin J. P., Sidoti J., Huni B., Lucchini S., Brüssow H. 1997; Molecular ecology of Streptococcus thermophilus bacteriophage infections in a cheese factory. Appl Environ Microbiol 63:3144–3150
   [Google Scholar]
7. Desiere F., Lucchini S., Canchaya C., Ventura M., Brüssow H. 2002; Comparative genomics of phages and prophages in lactic acid bacteria. Antonie Van Leeuwenhoek 82:73–91
   [Google Scholar]
8. Djordjevic G., Bojovic B., Miladinov N., Topisirovic L. 1997; Cloning and molecular analysis of promoter-like sequences isolated from the chromosomal DNA of Lactobacillus acidophilus ATCC 4356. Can J Microbiol 43:61–69
   [Google Scholar]
9. Durmaz E., Klaenhammer T. R. 2000; Genetic analysis of chromosomal regions of Lactococcus lactis acquired by recombinant lytic phages. Appl Environ Microbiol 66:895–903
   [Google Scholar]
10. Frick D. N., Richardson C. C. 2001; DNA primases. Annu Rev Biochem 70:39–80
    [Google Scholar]
11. Hill C., Massey I. J., Klaenhammer T. R. 1991; Rapid method to characterize lactococcal bacteriophage genomes. Appl Environ Microbiol 57:283–288
    [Google Scholar]
12. Horton R. M. 1995; PCR-mediated recombination and mutagenesis: SOEing together tailor-made genes. Mol Biotechnol 3:93–99
    [Google Scholar]
13. Huynh T. V., Young R. A., Davis R. W. 1985; Construction and screening cDNA libraries in λ gt10 and λ gt11. In DNA cloning vol. I pp 49–78 Edited by Glover I. D. M. Oxford: IRL Press;
    [Google Scholar]
14. Ilyina T. V., Gorbalenya A. E., Koonin E. V. 1992; Organization and evolution of bacterial and bacteriophage primase-helicase systems. J Mol Evol 34:351–357
    [Google Scholar]
15. Lucchini S., Desiere F., Brüssow H. 1999; Comparative genomics of Streptococcus thermophilus phage species supports a modular evolution theory. J Virol 73:8647–8656
    [Google Scholar]
16. Moineau S., Borkaev M., Holler B. J., Walker S. A., Kondo J. K., Vedamuthu E. R., Vandenbergh P. A. 1996; Isolation and characterization of lactococcal bacteriophages from cultured buttermilk plants in the United States. J Dairy Sci 79:2104–2111
    [Google Scholar]
17. Notarnicola S. M., Richardson C. C. 1993; The nucleotide binding site of the helicase/primase of bacteriophage T7. Interaction of mutant and wild-type proteins. J Biol Chem 268:27198–27207
    [Google Scholar]
18. Notarnicola S. M., Park K., Griffith J. D., Richardson C. C. 1995; A domain of the gene 4 helicase/primase of bacteriophage T7 required for the formation of an active hexamer. J Biol Chem 270:20215–20224
    [Google Scholar]
19. Nuesch J. P., Tattersall P. 1993; Nuclear targeting of the parvoviral replicator molecule NS1: evidence for self-association prior to nuclear transport. Virology 196:637–651
    [Google Scholar]
20. Sing W. D., Klaenhammer T. R. 1990; Characteristics of phage abortion conferred in lactococci by the conjugal plasmid pTR2030. J Gen Microbiol 136:1807–1815
    [Google Scholar]
21. Sturino J. M., Klaenhammer T. R. 2002; Expression of antisense RNA targeted against Streptococcus thermophilus bacteriophages. Appl Environ Microbiol 68:588–596
    [Google Scholar]
22. Sturino J. M., Klaenhammer T. R. 2004; Antisense RNA targeting primase interferes with bacteriophage replication in Streptococcus thermophilus . Appl Environ Microbiol 70:1735–1743
    [Google Scholar]
23. Sturino J. M., Klaenhammer T. R. 2006; Engineered bacteriophage-defense systems in bioprocessing. Nat Rev Microbiol 4:395–404
    [Google Scholar]
24. Tatusov R. L., Natale D. A., Garkavtsev I. V., Tatusova T. A., Shankavaram U. T., Rao B. S., Kiryutin B., Galperin M. Y., Fedorova N. D., Koonin E. V. 2001; The COG database: new developments in phylogenetic classification of proteins from complete genomes. Nucleic Acids Res 29:22–28
    [Google Scholar]
25. Thompson J. D., Gibson T. J., Plewniak F., Jeanmougin F., Higgins D. G. 1997; The clustal_x Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882
    [Google Scholar]
26. Wang D., Yuan W., Davis I., Parrish C. R. 1998; Nonstructural protein-2 and the replication of canine parvovirus. Virology 240:273–281
    [Google Scholar]
27. Ziegelin G., Scherzinger E., Lurz R., Lanka E. 1993; Phage P4 alpha protein is multifunctional with origin recognition, helicase and primase activities. EMBO J 12:3703–3708
    [Google Scholar]
28. Ziegelin G., Linderoth N. A., Calendar R., Lanka E. 1995; Domain structure of phage P4 alpha protein deduced by mutational analysis. J Bacteriol 177:4333–4341
    [Google Scholar]