Acquisition of multidrug resistance transposon Tn6061 and IS6100-mediated large chromosomal inversions in Pseudomonas aeruginosa clinical isolates

References

1. Aubert D., Naas T., Nordmann P. 2003; IS 1999 increases expression of the extended-spectrum β-lactamase VEB-1 in Pseudomonas aeruginosa. J Bacteriol 185:5314–5319
   [Google Scholar]
2. Avila P., de la Cruz F., Ward E., Grinsted J. 1984; Plasmids containing one inverted repeat of Tn 21 can fuse with other plasmids in the presence of Tn 21 transposase. Mol Gen Genet 195:288–293
   [Google Scholar]
3. Badía J., Ibáñez E., Sabaté M., Baldomà L., Aguilar J. 1998; A rare 920-kilobase chromosomal inversion mediated by IS 1 transposition causes constitutive expression of the yiaK-S operon for carbohydrate utilization in Escherichia coli. J Biol Chem 273:8376–8381
   [Google Scholar]
4. Bonomo R. A., Szabo D. 2006; Mechanisms of multidrug resistance in Acinetobacter species and Pseudomonas aeruginosa. Clin Infect Dis 43:S49–S56
   [Google Scholar]
5. Boyd D., Peters G. A., Cloeckaert A., Boumedine K. S., Chaslus-Dancla E., Imberechts H., Mulvey M. R. 2001; Complete nucleotide sequence of a 43-kilobase genomic island associated with the multidrug resistance region of Salmonella enterica serovar Typhimurium DT104 and its identification in phage type DT120 and serovar Agona. J Bacteriol 183:5725–5732
   [Google Scholar]
6. Boyd D., Cloeckaert A., Chaslus-Dancla E., Mulvey M. R. 2002; Characterization of variant Salmonella genomic island 1 multidrug resistance regions from serovars Typhimurium DT104 and Agona. Antimicrob Agents Chemother 46:1714–1722
   [Google Scholar]
7. Carver T. J., Rutherford K. M., Berriman M., Rajandream M. A., Barrell B. G., Parkhill J. 2005; ACT: the Artemis Comparison Tool. Bioinformatics 21:3422–3423
   [Google Scholar]
8. Chandler M., Mahillon J. 2002; Insertion sequences revisited. In Mobile DNA II pp 305–366 Edited by Craig N. L., Cragie R., Gellert M., Lambowitz A. M. Washington, DC: ASM press;
   [Google Scholar]
9. Coyne S., Courvalin P., Galimand M. 2009; Acquisition of multidrug-resistance transposon Tn 6061, IS 6100-mediated chromosomal inversions, and hypermutator phenotype in Pseudomonas aeruginosa clinical isolates. In 49th Interscience Conference on Antimicrobial Agents and Chemotherapy abstract no. C1-086
   [Google Scholar]
10. Fournier P. E., Vallenet D., Barbe V., Audic S., Ogata H., Poirel L., Richet H., Robert C., Mangenot S. other authors 2006; Comparative genomics of multidrug resistance in Acinetobacter baumannii. PLoS Genet 2:e7
    [Google Scholar]
11. Girlich D., Naas T., Leelaporn A., Poirel L., Fennewald M., Nordmann P. 2002; Nosocomial spread of the integron-located veb-1-like cassette encoding an extended-spectrum β-lactamase in Pseudomonas aeruginosa in Thailand. Clin Infect Dis 34:603–611
    [Google Scholar]
12. Hansson K., Sköld O., Sundström L. 1997; Non-palindromic attl sites of integrons are capable of site-specific recombination with one another and with secondary targets. Mol Microbiol 26:441–453
    [Google Scholar]
13. Klockgether J., Reva O., Larbig K., Tümmler B. 2004; Sequence analysis of the mobile genome island pKLC102 of Pseudomonas aeruginosa C. J Bacteriol 186:518–534
    [Google Scholar]
14. Kresse A. U., Dinesh S. D., Larbig K., Römling U. 2003; Impact of large chromosomal inversions on the adaptation and evolution of Pseudomonas aeruginosa chronically colonizing cystic fibrosis lungs. Mol Microbiol 47:145–158
    [Google Scholar]
15. Kresse A. U., Blocker H., Römling U. 2006; IS Pa20 advances the individual evolution of Pseudomonas aeruginosa clone C subclone C13 strains isolated from cystic fibrosis patients by insertional mutagenesis and genomic rearrangements. Arch Microbiol 185:245–254
    [Google Scholar]
16. Li H., Walsh T. R., Toleman M. A. 2009; Molecular analysis of the sequences surrounding bla_OXA-45 reveals acquisition of this gene by Pseudomonas aeruginosa via a novel IS CR element, IS CR5. Antimicrob Agents Chemother 53:1248–1251
    [Google Scholar]
17. Liu Y. G., Whittier R. F. 1995; Thermal asymmetric interlaced PCR: automatable amplification and sequencing of insert end fragments from P1 and YAC clones for chromosome walking. Genomics 25:674–681
    [Google Scholar]
18. Mathee K., Narasimhan G., Valdes C., Qiu X., Matewish J. M., Koehrsen M., Rokas A., Yandava C. N., Engels R. other authors 2008; Dynamics of Pseudomonas aeruginosa genome evolution. Proc Natl Acad Sci U S A 105:3100–3105
    [Google Scholar]
19. Motsch S., Schmitt R. 1984; Replicon fusion mediated by a single-ended derivative of transposon Tn 1721. Mol Gen Genet 195:281–287
    [Google Scholar]
20. Naas T., Namdari F., Bogaerts P., Huang T. D., Glupczynski Y., Nordmann P. 2008; Genetic structure associated with bla_OXA-18, encoding a clavulanic acid-inhibited extended-spectrum oxacillinase. Antimicrob Agents Chemother 52:3898–3904
    [Google Scholar]
21. Oliver A., Cantón R., Campo P., Baquero F., Blázquez J. 2000; High frequency of hypermutable Pseudomonas aeruginosa in cystic fibrosis lung infection. Science 288:1251–1254
    [Google Scholar]
22. Partridge S. R., Recchia G. D., Stokes H. W., Hall R. M. 2001; Family of class 1 integrons related to In4 from Tn 1696. Antimicrob Agents Chemother 45:3014–3020
    [Google Scholar]
23. Rivera S. L., Vargas E., Ramírez-Díaz M. I., Campos-García J., Cervantes C. 2008; Genes related to chromate resistance by Pseudomonas aeruginosa PAO1. Antonie Van Leeuwenhoek 94:299–305
    [Google Scholar]
24. Rodríguez-Rojas A., Blázquez J. 2009; The Pseudomonas aeruginosa pfpI gene plays an antimutator role and provides general stress protection. J Bacteriol 191:844–850
    [Google Scholar]
25. Sabtcheva S., Galimand M., Gerbaud G., Courvalin P., Lambert T. 2003; Aminoglycoside resistance gene ant(4′)-IIb of Pseudomonas aeruginosa BM4492, a clinical isolate from Bulgaria. Antimicrob Agents Chemother 47:1584–1588
    [Google Scholar]
26. Sambrook J., Russell D. 2001 Molecular Cloning: a Laboratory Manual, 3rd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory;
27. Stokes H. W., Elbourne L. D., Hall R. M. 2007; Tn 1403, a multiple-antibiotic resistance transposon made up of three distinct transposons. Antimicrob Agents Chemother 51:1827–1829
    [Google Scholar]
28. Tamber S., Ochs M. M., Hancock R. E. 2006; Role of the novel OprD family of porins in nutrient uptake in Pseudomonas aeruginosa. J Bacteriol 188:45–54
    [Google Scholar]
29. Toleman M. A., Walsh T. R. 2008; Evolution of the IS CR3 group of IS CR elements. Antimicrob Agents Chemother 52:3789–3791
    [Google Scholar]
30. Toleman M. A., Bennett P. M., Walsh T. R. 2006; IS CR elements: novel gene-capturing systems of the 21st century?. Microbiol Mol Biol Rev 70:296–316
    [Google Scholar]